Labels

• algorithm

  algorithm

  Pathway reconstruction algorithm to add to SPRAS

• analysis

  analysis

  Analysis of PRA outputs

• awaiting-author

  awaiting-author

  Author of the PR needs to fix something from a review / etc.

• blocked-by-other-pr

  blocked-by-other-pr

• bug

  bug

  Something isn't working

• dependencies

  dependencies

  Pull requests that update a dependency file

• discussion

  discussion

  Further information is requested

• documentation

  documentation

  Improvements or additions to documentation

• duplicate

  duplicate

  This issue or pull request already exists

• easy

  easy

  PRs which take at most a minute to review with little thinking.

• enhancement

  enhancement

  New feature or request

• good first issue

  good first issue

  Good for newcomers

• help wanted

  help wanted

  Extra attention is needed

• infrastructure

  infrastructure

  misc. changes made to SPRAS itself

• invalid

  invalid

  This doesn't seem right

• license-conflict

  license-conflict

  Algorithm has a license incompatible with SPRAS (#246)

• merge-conflict

  merge-conflict

  This PR has merge conflicts.

• needed for benchmarking

  needed for benchmarking

  Priority PRs needed for the benchmarking paper

• P-high

  P-high

  This is a blocker for many PRs/issues/features

• P-medium

  P-medium

  medium prirotity; this is needed for some external service or another PR

• performance

  performance

  issues related to runtime

• potential-intro-project

  potential-intro-project

  A well-scoped, standalone project that would be ideal for a new developer to take on.

• python

  python

  Pull requests that update python code

• refactor

  refactor

  Changes that don't actually improve anything except for code quality.

• tuning

  tuning

  Workflow-spanning algorithm tuning

• upstream

  upstream

  This is not something we can resolve in SPRAS itself.

• wontfix

  wontfix

  This will not be worked on