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8 changes: 3 additions & 5 deletions .gitlab-ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,11 @@
include:
- component: $CI_SERVER_FQDN/dev-ops/templates/automatisation/ci-cd/pipeline-java-container-image@~latest
inputs:
java_builder_artifacts_path: "**/target/*.{war,jar}"
java_builder_build_command: "clean package -f file_checker_exec/pom.xml"
java_builder_artifacts_path: "**/target/*.{war,jar}"
java_builder_maven_quality_enable: "false"
java_builder_maven_settings_path: "./file_checker_exec/settings.xml"
java_builder_publish_command: "deploy -f file_checker_exec/pom.xml"
java_builder_quality_command: "checkstyle:check -f file_checker_exec/pom.xml"
java_builder_tests_command: "test -f file_checker_exec/pom.xml"
java_builder_quality_command: "checkstyle:check"
java_builder_configuration_file: "file_checker_exec/pom.xml"
java_publish_enable: "true"
pipeline_enable_sonarqube: "false"
lint_yamllint_enable: "false"
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2 changes: 1 addition & 1 deletion file_checker_exec/pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<modelVersion>4.0.0</modelVersion>
<groupId>fr.ifremer</groupId>
<artifactId>file_checker_exec</artifactId>
<version>3.0.3</version>
<version>3.0.4</version>

<name>Argo NetCDF file format checker</name>

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17 changes: 10 additions & 7 deletions file_checker_spec/NVS/R01.jsonld
Original file line number Diff line number Diff line change
Expand Up @@ -262,16 +262,19 @@
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R01/current/METAAUX/",
"pav:authoredOn": "2024-09-11 11:40:41.0",
"pav:hasCurrentVersion": {
"pav:hasVersion": {
"@id": "http://vocab.nerc.ac.uk/collection/R01/current/METAAUX/1/"
},
"pav:authoredOn": "2026-04-29 13:04:08.0",
"pav:hasCurrentVersion": {
"@id": "http://vocab.nerc.ac.uk/collection/R01/current/METAAUX/2/"
},
"dce:identifier": "SDN:R01::METAAUX",
"pav:version": "1",
"pav:version": "2",
"skos:notation": "SDN:R01::METAAUX",
"skos:altLabel": "METAAUX",
"dc:date": "2024-09-11 11:40:41.0",
"owl:versionInfo": "1",
"dc:date": "2026-04-29 13:04:08.0",
"owl:versionInfo": "2",
"skos:prefLabel": {
"@language": "en",
"@value": "Argo auxiliary meta-data"
Expand Down Expand Up @@ -361,8 +364,8 @@
"dc:description": "Terms describing the type of data contained in an Argo netCDF file. Argo netCDF variable DATA_TYPE is populated by R01 prefLabel.",
"dc:title": "Argo data type",
"skos:prefLabel": "Argo data type",
"owl:versionInfo": "4",
"dc:date": "2024-09-13 03:00:00.0",
"owl:versionInfo": "5",
"dc:date": "2026-04-30 03:00:00.0",
"skos:altLabel": "DATA_TYPE",
"dc:creator": "Argo Data Management Team",
"dc:alternative": "DATA_TYPE",
Expand Down
91 changes: 47 additions & 44 deletions file_checker_spec/NVS/R03.jsonld
Original file line number Diff line number Diff line change
Expand Up @@ -156,45 +156,6 @@
},
"pav:authoredOn": "2025-11-26 10:16:04.0"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/",
"pav:hasVersion": [
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/1/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/2/"
}
],
"@type": "skos:Concept",
"skos:definition": {
"@language": "en",
"@value": "Not Used. Number of samples in each pressure bin. Local_Attributes:{long_name:Number of samples in each pressure bin; standard_name:-; units:count; valid_min:-; valid_max:-; fill_value:NC_FILL_SHORT}. Properties:{category:ic; data_type:short}."
},
"void:inDataset": {
"@id": "http://vocab.nerc.ac.uk/.well-known/void"
},
"owl:deprecated": "true",
"skos:note": {
"@language": "en",
"@value": "deprecated"
},
"dc:identifier": "SDN:R03::NB_SAMPLE_MCOMS",
"skos:prefLabel": {
"@language": "en",
"@value": "Number of MCOMS samples in each pressure bin"
},
"owl:versionInfo": "3",
"dc:date": "2025-11-26 10:16:04.0",
"skos:altLabel": "NB_SAMPLE_MCOMS",
"skos:notation": "SDN:R03::NB_SAMPLE_MCOMS",
"pav:version": "3",
"dce:identifier": "SDN:R03::NB_SAMPLE_MCOMS",
"pav:hasCurrentVersion": {
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/3/"
},
"pav:authoredOn": "2025-11-26 10:16:04.0"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_SFET/",
"pav:hasVersion": {
Expand Down Expand Up @@ -307,6 +268,48 @@
},
"pav:authoredOn": "2025-11-25 10:14:03.0"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/",
"pav:hasVersion": [
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/3/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/2/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/1/"
}
],
"@type": "skos:Concept",
"skos:definition": {
"@language": "en",
"@value": "Number of samples in each pressure bin. Local_Attributes:{long_name:Number of samples in each pressure bin; standard_name:-; units:count; valid_min:-; valid_max:-; fill_value:NC_FILL_SHORT}. Properties:{category:ic; data_type:short}."
},
"void:inDataset": {
"@id": "http://vocab.nerc.ac.uk/.well-known/void"
},
"owl:deprecated": "false",
"skos:note": {
"@language": "en",
"@value": "accepted"
},
"dc:identifier": "SDN:R03::NB_SAMPLE_MCOMS",
"skos:prefLabel": {
"@language": "en",
"@value": "Number of MCOMS samples in each pressure bin"
},
"owl:versionInfo": "4",
"dc:date": "2026-05-18 09:45:19.0",
"skos:altLabel": "NB_SAMPLE_MCOMS",
"skos:notation": "SDN:R03::NB_SAMPLE_MCOMS",
"pav:version": "4",
"dce:identifier": "SDN:R03::NB_SAMPLE_MCOMS",
"pav:hasCurrentVersion": {
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/4/"
},
"pav:authoredOn": "2026-05-18 09:45:19.0"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_SUNA/",
"pav:hasVersion": [
Expand Down Expand Up @@ -4399,9 +4402,6 @@
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_STM/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_SFET/"
},
Expand All @@ -4411,6 +4411,9 @@
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_CTD/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_MCOMS/"
},
{
"@id": "http://vocab.nerc.ac.uk/collection/R03/current/NB_SAMPLE_SUNA/"
},
Expand Down Expand Up @@ -4693,8 +4696,8 @@
"dc:description": "Terms describing individual measured parameters or phenomena, used to mark up sets of data in Argo netCDF arrays. Argo netCDF variables PARAMETER, STATION_PARAMETERS, HISTORY_PARAMETER and TRAJECTORY_PARAMETERS are populated by R03 altLabel. R03 altLabel is also used to name netCDF variables. Detailed information (incl. about Local_Attributes and Properties) is in the user manual (https://dx.doi.org/10.13155/29825), in the Reference Table 3 section.",
"dc:title": "Argo parameter codes",
"skos:prefLabel": "Argo parameter codes",
"owl:versionInfo": "13",
"dc:date": "2026-01-16 02:00:00.0",
"owl:versionInfo": "14",
"dc:date": "2026-05-19 03:00:01.0",
"skos:altLabel": "PARAMETER",
"dc:creator": "Argo Data Management Team",
"dc:alternative": "PARAMETER",
Expand Down
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